{"shas":[["c907382091307e7e08d67d92c2359bad33d367c4","3e3f4683fc8681910829f55e96e4b04ecdf7c6eb@fhcrc.org","Adding some convexify comments.","Erick Matsen"],["ea36537056b15c7ecdb60e098a5f22d161abf1f5","3e3f4683fc8681910829f55e96e4b04ecdf7c6eb@fhcrc.org","Adding some convexify comments.","Erick Matsen"],["37fd5ff85856c2ee3b486d619fb1e8ce4c5d9bc2","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Updating the build script for our updated dependencies.","Aaron Gallagher"],["21e3c4d46e236241758c8e7e0fec89cb66097735","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Hotfixing a bug: integer newick leaf names were being suffixed with '.'","Aaron Gallagher"],["d0f2c24fd6ee67465b97a7250d34f919b2c0347e","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Adding a 'debug' target for building debug binaries.","Aaron Gallagher"],["f3737beb843cb7013bae4ae745d157a03fb76eab","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Adding a more informative error message to `rppr convexify`.\n\nSpecifically, for the case of when a leaf name appears in the color csv\nfile without that same name appearing in the tree.","Aaron Gallagher"],["da91f551f70bd909cb6e389b48214f9e14676810","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Initial tabularizing of guppy commands.","Aaron Gallagher"],["c77610fa85404998513d80fc2e223b55fa262a78","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Merge branch '134-tabular-data' into 87-rarefaction","Aaron Gallagher"],["01246df47889ebc10df043ed28c6a38279f5f862","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Adding `guppy rarefact`.","Aaron Gallagher"],["6b01a7903890847e62172ccfb666830f4bac10d6","3e3f4683fc8681910829f55e96e4b04ecdf7c6eb@fhcrc.org","Merge remote-tracking branch 'origin/100-2-mft' into 100-2-mft","Erick Matsen"],["293a97605d002faa5659d15dbc3beb76078a8ef9","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Some fixes on voronoi.\n\n * Removed some old code that was left over from mass-based voronoi which\n   was causing problems.\n * Generally cleaned up `rppr voronoi` to use wonderful Batteries\n   features.\n * Added a failwith to Voronoi.uncolor_leaves to prevent future hanging.","Aaron Gallagher"],["437bc09f156ddd1b4e671f3b5ffe4d6b65b5996e","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Excluding k_max from the results.","Aaron Gallagher"],["20e79a9011b7c0ce25c4f7ab727b13c0132167b3","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Minor fixes to rarefaction's implementation.","Aaron Gallagher"],["33386325a919107035170229df3317cbb9862f53","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Updating rarefact, pd, and wpd to only work on the best placements.","Aaron Gallagher"],["c98984f0d0f3d779ff110314ee6482dea856d526","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Adding a new thing to test_util.","Aaron Gallagher"],["038b1ecdcf210429890816fee0c91053e7053cd0","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Adding a test for rarefaction.","Aaron Gallagher"],["78c7aa3ec0ff6d23582b65b06dc6315b21ffed47","dbaf6e9e1430d11600e790a1c51cd1f679d5e81b@gmail.com","Merge branch '87-rarefaction' into dev\n\nConflicts:\n\tpplacer_src/rppr_voronoi.ml\n\nCloses #87; closes #134.","Aaron Gallagher"],["36189e827071dfb83a28048041372572cecddd59","3e3f4683fc8681910829f55e96e4b04ecdf7c6eb@fhcrc.org","going for orange-green","Erick Matsen"],["bf2e25eedd8b6403c550fa1a172e0c0281cd66ec","3e3f4683fc8681910829f55e96e4b04ecdf7c6eb@fhcrc.org","Merge remote-tracking branch 'origin/dev' into 96-2-brewer","Erick Matsen"],["2c8c2ead117d10451449863eb476c3ca2807cb34","3e3f4683fc8681910829f55e96e4b04ecdf7c6eb@fhcrc.org","Merging in 96-2-brewer. Closes #96.","Erick Matsen"]],"ref":"refs/heads/100-2-mft","size":22,"head":"2994bbf7e9c806fc9f032a591ac2316b32a0857b","push_id":40801375}