{"issue":{"pull_request":{"diff_url":null,"html_url":null,"patch_url":null},"state":"open","milestone":null,"user":{"avatar_url":"https://secure.gravatar.com/avatar/bbaefa2db0cc2b3d9463fbe442d5f3b5?d=https://a248.e.akamai.net/assets.github.com%2Fimages%2Fgravatars%2Fgravatar-140.png","gravatar_id":"bbaefa2db0cc2b3d9463fbe442d5f3b5","url":"https://api.github.com/users/esimonds","login":"esimonds","id":1001940},"assignee":null,"labels":[],"updated_at":"2011-11-18T00:31:02Z","comments":2,"closed_at":null,"url":"https://api.github.com/repos/nolanlab/spade/issues/14","body":"There is a bug in an upstream package which gives you a broken version of the file \"ks.so\" on OS X 64-bit installations.  People who previously installed SPADE may not have this error, because old versions of ks.so are not overwritten.\r\n\r\nThe solution to the bug is to download the attached file ks.so from [here](http://www.stanford.edu/~esimonds/ks.so) and overwrite the one in /Library/Frameworks/R.framework/Versions/2.13/Resources/library/ks/libs/x86_64/ks.so on your Macintosh HD.\r\n\r\nThis bug affects you if after installing, you get the following error:\r\n\r\n> library(spade)\r\nLoading required package: igraph\r\nError in dyn.load(file, DLLpath = DLLpath, ...) : \r\n  unable to load shared object '/Library/Frameworks/R.framework/Versions/2.13/Resources/library/ks/libs/x86_64/ks.so':\r\n  dlopen(/Library/Frameworks/R.framework/Versions/2.13/Resources/library/ks/libs/x86_64/ks.so, 6): Library not loaded: @rpath/R.framework/Versions/2.13/Resources/lib/libR.dylib\r\n  Referenced from: /Library/Frameworks/R.framework/Versions/2.13/Resources/library/ks/libs/x86_64/ks.so\r\n  Reason: image not found\r\nError: package/namespace load failed for 'spade'\r\n\r\n\r\n","html_url":"https://github.com/nolanlab/spade/issues/14","number":14,"title":"unable to load shared object \"ks.so\" on OS X 64-bit","id":2273246,"created_at":"2011-11-17T20:18:56Z"},"action":"created","comment":{"user":{"avatar_url":"https://secure.gravatar.com/avatar/bbaefa2db0cc2b3d9463fbe442d5f3b5?d=https://a248.e.akamai.net/assets.github.com%2Fimages%2Fgravatars%2Fgravatar-140.png","gravatar_id":"bbaefa2db0cc2b3d9463fbe442d5f3b5","url":"https://api.github.com/users/esimonds","login":"esimonds","id":1001940},"updated_at":"2011-11-18T00:31:02Z","url":"https://api.github.com/repos/nolanlab/spade/issues/comments/2784195","body":"I tested it on 2 other Macs but yeah it might not work in Lion or\nsomething.  I haven't mucked around with packages, but the current\nversion in Bioconductor is definitely broken.\n\nSent from my iPhone\n\nOn Nov 17, 2011, at 1:57 PM, Robert Bruggner\n<reply@reply.github.com>\nwrote:\n\n> Can the issue be fixed by re-installing the \"ks\" package?\n>\n> I'm just concerned that the ks.so file that you've linked to will not be compatible with other peoples' OS / library paths.\n>\n> ---\n> Reply to this email directly or view it on GitHub:\n> https://github.com/nolanlab/spade/issues/14#issuecomment-2782635","id":2784195,"created_at":"2011-11-18T00:31:02Z"}}