{"shas":[["45eb4bf8f88b001a2711941a156a9c182ec1abc0","2713355827c21e9da6b8e25fdbb80553768dad61@fhcrc.org","Show failing sequence ID in PhylipWriter\n\n* ValueError raised on duplicate sequence ID in PhylipWriter now\n  identifies the (possibly truncated) problematic sequence ID\n* Added a simple test.","Connor McCoy"],["0651c70dbe61035867ecff9eff68913137f454d9","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Phylip duplicate ID check should have been on the sanitised names (old bug)","peterjc"],["ed40a878142569d2137597888eadca58d622904c","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","test_SeqIO.py output needed updating for recent exception message change","peterjc"],["a641816ac4d85e6203a52c2f2757817f2cdec338","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","test_SeqIO_write.py needed updating for recent exception message change","peterjc"],["f617101dfaf358d38e90ed778c98588ee7775c72","031b2c874c73f0894e2716cfcd696f81e80aaf20@gmail.com","Phylo: converted docstrings to reStructuredText\n\nWorks with epydoc. See issue #3220.","Eric Talevich"],["b2ca758c63fc7bf428e331b21662addcc590577c","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Comment change to avoid epydoc warning 'Lists must be indented'","peterjc"],["e3d67849c6ae69bef6123f03eab53f30c299b536","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Use epytext rather than plain text for nicer Bio.Align API pages","peterjc"],["3cdd913ddd5930c6e1cafb480511e7f86432a0bc","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Use epytext for nicer Bio.Align.Generic API pages","peterjc"],["bf46f3c02a0c9c45f34ff2ec3ce85f7d219f66e7","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Use epytext for nicer Bio.Align.Applications API pages","peterjc"],["99bd5552190851350214b9ea54fc8e94c8ee9b38","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Removed unused import","peterjc"],["a8b92c59bdf455feecdc6baa81c8b31d9d5cd240","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Add Eric to contributors for next release (Bio.Phylo API docs)","peterjc"],["8784164d286828b60f5b684ce6913dd95a02e5bf","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Use __all__ in Bio.Align.Applications, shows the wrappers in the API docs","peterjc"],["32171e6150db5f4a25687f5090b4748c1302ea47","c01a39a76d96e917f87dcda7aac0ff07d778d5c1@googlemail.com","Fix new test's exception handling for Python 3 (and 2.4)","peterjc"]],"repo":"cmccoy/biopython","actor":"cmccoy","ref":"refs/heads/master","size":13,"head":"32171e6150db5f4a25687f5090b4748c1302ea47","actor_gravatar":"0cf46d3ffedb153a97fe69cb4719e0fd","push_id":30889537}