{"shas":[["e54c3b2c9ba6fd1a65a21b7ecee189c03fd1d821","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","improved VCF reading","Christopher Lee"],["fcb6c7bc776aa3c63610285d4f7bc3e12a97c763","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","refactored SNPSet, ReplicateSet, GeneSNPDict as generators / filter functions","Christopher Lee"],["293a2b0180f97df96d6ff90683a9fe595148b600","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","separated sets of analysis functions into sections","Christopher Lee"],["0923dd8e69fde84f90611807da816fdedacd5e47","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","separated vcf reading from the false positive filtering functions","Christopher Lee"],["fe26e23535ef664234a9d5d8d1cabb6b901ae6cf","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","got rid of TagDict, added multi-exon gene analysis","Christopher Lee"],["61e58a172b014cd69151036e3446081bd8f9677a","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","revised analyze reference docs to reflect refactoring","Christopher Lee"],["58b25c00b58bcf00000bcb4fd64bca94e123bed9","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","made SNP class only cast all-caps attribute names to lowercase","Christopher Lee"],["3c35cc12abf20268b19d65c7a13085f7b0818009","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","added docs for analyze_nonsyn(), analyze_monodom()","Christopher Lee"],["2f17f02e3df59cdd0de8b4e671d1e25e8f635b95","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","added SNP.__repr__() method","Christopher Lee"],["7c6b8a77585697284ad72394538b8b1148e43e89","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","updated tutorial to reflect analyze module refactoring","Christopher Lee"],["9a5b0bcd6b1d3c40245193b93d7f089a65cefb93","7e495cdd1932c0fd845f105649d9852b9d6fbe8f@chem.ucla.edu","fixed minor typos in analyze docs","Christopher Lee"]],"ref":"refs/heads/master","size":11,"head":"9a5b0bcd6b1d3c40245193b93d7f089a65cefb93","push_id":40069003}