{"shas":[["6f1b066270902198a7175ff6c1b05ebc8d1919be","1c4d00be5dc5190a134a33148b421d0ebd469860@live.co.uk","Added Brent's method","Heng Li"],["1e3c2001afcb80b5eaa4c3f88df9da7b01b62524","1c4d00be5dc5190a134a33148b421d0ebd469860@live.co.uk","Perform posterior contrast for small LRT\n\nPosterior contrast is much slower than LRT. Nonetheless, posterior P-value is\nmore robust to sequencing artifacts. Thus we may combine the two to achieve a\nbalance between speed and low FPR.","Heng Li"],["088e13c32453fb533b7bb1c65a573f9b90a23625","1c4d00be5dc5190a134a33148b421d0ebd469860@live.co.uk","added LRT based permutation; not used though","Heng Li"],["4b2c08bb86ca4ed4959e4cb77a28f7d6fc19f5c9","1c4d00be5dc5190a134a33148b421d0ebd469860@live.co.uk","fixed a bug\n\nactually not fix, but hide it","Heng Li"],["f53a051d68bf312ac8d5865210fae7a9808c0fb9","1c4d00be5dc5190a134a33148b421d0ebd469860@live.co.uk","print G3 if HWE is small","Heng Li"]],"repo":"lh3/samtools","actor":"lh3","ref":"refs/heads/master","size":5,"head":"f53a051d68bf312ac8d5865210fae7a9808c0fb9","actor_gravatar":"9bad6dc5cd14c6e9326a81d91b31eabb","push_id":29127433}